Examples

kegg_conv

These examples call the KEGG Conv operation. kegg_conv returns the request URL, column names, and data in a KeggTupleList. Construct a DataFrame from output.data and output.colnames:

output = KEGGAPI.kegg_conv("genes", "ncbi-geneid:948364")
@assert output isa KEGGAPI.KeggTupleList
DataFrame(output.data, output.colnames)
1×2 DataFrame
RowTarget IDSource ID
StringString
1ncbi-geneid:948364eco:b3809
output = KEGGAPI.kegg_conv("ncbi-geneid", "eco:b0002")
@assert output isa KEGGAPI.KeggTupleList
DataFrame(output.data, output.colnames)
1×2 DataFrame
RowTarget IDSource ID
StringString
1eco:b0002ncbi-geneid:945803
output = KEGGAPI.kegg_conv("ncbi-proteinid", ["hsa:10458", "ece:Z5100"])
@assert output isa KEGGAPI.KeggTupleList
DataFrame(output.data, output.colnames)
2×2 DataFrame
Rowsourcencbi-proteinid
StringString
1hsa:10458ece:Z5100
2ncbi-proteinid:NP_001372056ncbi-proteinid:AAG58814
output = KEGGAPI.kegg_conv("genes", "uniprot:P0A6F9")
@assert output isa KEGGAPI.KeggTupleList
DataFrame(output.data, output.colnames)
2×2 DataFrame
RowTarget IDSource ID
StringString
1up:P0A6F9eco:b4142
2up:P0A6F9ecj:JW4102