FstPermutations.jl

PopGen.jl/src/FStatistics/FstPermutations.jl

📦 not exported	🔵 exported by PopGen.jl

📦 _fst_permutate

_fst_permute(population_1::T, population_2::T) where T<:AbstractMatrix

Returns two matrices with rows (samples) shuffled between them. Respects the number of rows of the original matrices (i.e. population sizes).

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📦 _fst_permutation

_fst_permution(data::PopData, method::Function, iterations::Int64)

Returns a PairwiseFST object containing a dataframe of Pairwise FST calculations. The contained dataframe has FST values below the diagonal and P values above it. This method is used internally and wrapped by the public API provided in pairwisefst().