Datasets.jl
PopGenCore.jl/src/Datasets.jl
| 📦 not exported | 🟪 exported by PopGenCore.jl | 🔵 exported by PopGen.jl |
|---|
📦 dataset
dataset(::String)
Load an example dataset from either "gulfsharks" (SNP) or "nancycats" (microsatellite). Can also use "sharks" and "cats"
as shorthands. Use ?@nancycats and ?@gulfsharks to learn more about
these datasets.
Example
ncats = dataset("nancycats")
gsharks = dataset("sharks")
🟪🔵 @nancycats
@nancycats
Returns a PopObj of corresponding "nancycats" dataset as featured in
the R package adegenet. This is microsatellite data of 9 loci in 237
individuals across 17 populations.
Example
ncats = @nancycats
🟪🔵 @gulfsharks
@gulfsharks
Returns a PopObj corresponding the Blacknose shark dataset as used in
Dimens et al. 2019. This is a mid-sized SNP dataset of 2213 SNPs in 212
individuals, across 7 populations.
Example
sharks = @gulfsharks